BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BA0AB021E03LP1|AL427770
         (143 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1105                                                         119   1e-27

>3x_Contig1105 
          Length = 3123

 Score =  119 bits (60), Expect = 1e-27
 Identities = 63/64 (98%)
 Strand = Plus / Minus

                                                                        
Query: 68   tataatgatttatcccgcgatattaccatatttatggtaatatcgcggggattataatat 127
            |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1990 tataatgatttaccccgcgatattaccatatttatggtaatatcgcggggattataatat 1931

                
Query: 128  atat 131
            ||||
Sbjct: 1930 atat 1927


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.38    0.711     1.31 

Gapped
Lambda     K      H
    1.38    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 959
Number of Sequences: 1807
Number of extensions: 959
Number of successful extensions: 104
Number of sequences better than 1.0e-20: 1
length of query: 143
length of database: 10,358,551
effective HSP length: 15
effective length of query: 128
effective length of database: 10,331,446
effective search space: 1322425088
effective search space used: 1322425088
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 49 (98.0 bits)